SHOGoiN Cell Transcriptome: GSM1269195

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269195


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T200Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 129.5107
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 100.7325
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 69.5300
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 44.6695
5 ENSG00000137801 THBS1 thrombospondin 1 43.9729
6 ENSG00000075624 ACTB actin, beta 39.6149
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 36.6390
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.3622
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.6952
10 ENSG00000105974 CAV1 caveolin 1, caveolae protein, 22kDa 27.3491

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0917
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0917
60673 ENSG00000283118 NA -0.0917
60672 ENSG00000283110 NA -0.0917
60671 ENSG00000283108 NA -0.0917
60670 ENSG00000283103 NA -0.0917
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0917
60668 ENSG00000283098 NA -0.0917
60667 ENSG00000283097 NA -0.0917
60666 ENSG00000283096 NA -0.0917

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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