SHOGoiN Cell Transcriptome: GSM1269197

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269197


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T202Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 184.7584
2 ENSG00000137801 THBS1 thrombospondin 1 84.8524
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 75.3080
4 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 31.2215
6 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 23.7015
7 ENSG00000115414 FN1 fibronectin 1 22.8691
8 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 22.8267
9 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 21.1958
10 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 20.3436
57162 ENSG00000277087 NA -0.0674

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277103 NA -0.0674
57168 ENSG00000277099 NA -0.0674
57166 ENSG00000277096 NA -0.0674
57165 ENSG00000277095 NA -0.0674
57163 ENSG00000277089 NA -0.0674
57162 ENSG00000277087 NA -0.0674
10 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 20.3436
9 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 21.1958
8 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 22.8267
7 ENSG00000115414 FN1 fibronectin 1 22.8691

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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