SHOGoiN Cell Transcriptome: GSM1269198

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269198


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T203Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 117.9077
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 80.7199
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 73.9540
4 ENSG00000133110 POSTN periostin 50.8344
5 ENSG00000075624 ACTB actin beta 46.9481
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 45.9662
7 ENSG00000146197 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 43.7384
8 ENSG00000106366 SERPINE1 serpin family E member 1 41.5766
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 38.8950
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 31.3287

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277063 MIR8084 microRNA 8084 -0.0998
57169 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.0998
57167 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.0998
57166 ENSG00000277057 MIR6779 microRNA 6779 -0.0998
57165 ENSG00000277056 NA -0.0998
57163 ENSG00000277052 MIR6763 microRNA 6763 -0.0998
57162 ENSG00000277051 NA -0.0998
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 31.3287
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 38.8950
8 ENSG00000106366 SERPINE1 serpin family E member 1 41.5766

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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