SHOGoiN Cell Transcriptome: GSM1269199

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269199


Profile download
8000301-738Sequence Read ArchiveSRP033135SRP033135_T204Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 143.8687
2 ENSG00000155657 TTN titin 86.2789
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.7346
4 ENSG00000167552 TUBA1A tubulin, alpha 1a 55.2959
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 55.1852
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 51.7996
7 ENSG00000176887 SOX11 SRY (sex determining region Y)-box 11 27.7218
8 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 27.6752
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.4013
10 ENSG00000213639 PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 26.8652

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0854
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0854
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0854
60672 ENSG00000283118 NA -0.0854
60671 ENSG00000283110 NA -0.0854
60670 ENSG00000283108 NA -0.0854
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0854
60668 ENSG00000283098 NA -0.0854
60667 ENSG00000283097 NA -0.0854
60666 ENSG00000283096 NA -0.0854

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...