SHOGoiN Cell Transcriptome: GSM1269199

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269199


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T204Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 143.8687
2 ENSG00000155657 TTN titin 86.2789
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.7346
4 ENSG00000167552 TUBA1A tubulin alpha 1a 55.2959
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 55.1852
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 51.7996
7 ENSG00000176887 SOX11 SRY-box 11 27.7218
8 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 27.6752
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.4013
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 26.8652

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277066 NA -0.0854
57169 ENSG00000277063 MIR8084 microRNA 8084 -0.0854
57168 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.0854
57166 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.0854
57165 ENSG00000277057 MIR6779 microRNA 6779 -0.0854
57164 ENSG00000277056 NA -0.0854
57162 ENSG00000277052 MIR6763 microRNA 6763 -0.0854
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 26.8652
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 27.4013
8 ENSG00000127603 MACF1 microtubule-actin crosslinking factor 1 27.6752

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...