SHOGoiN Cell Transcriptome: GSM1269200

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269200


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T205Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 100.0839
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 94.5399
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 82.0356
4 ENSG00000115414 FN1 fibronectin 1 68.7847
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 45.7522
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 42.0305
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 39.1762
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 35.5533
9 ENSG00000075624 ACTB actin beta 28.2527
10 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 27.5282

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277039 NA -0.1152
57170 ENSG00000277035 NA -0.1152
57169 ENSG00000277034 NA -0.1152
57168 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.1152
57167 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.1152
57166 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.1152
57165 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1152
57163 ENSG00000277024 NA -0.1152
10 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 27.5282
9 ENSG00000075624 ACTB actin beta 28.2527

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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