SHOGoiN Cell Transcriptome: GSM1269202

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269202


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T207Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 105.8080
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 91.5052
3 ENSG00000115414 FN1 fibronectin 1 74.0215
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 70.6871
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.1200
6 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 37.3650
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 36.5753
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.7636
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 34.1622
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 25.7933

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1141
57169 ENSG00000277024 NA -0.1141
57167 ENSG00000277022 NA -0.1141
57165 ENSG00000277020 NA -0.1141
57164 ENSG00000277017 NA -0.1141
57163 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.1141
57162 ENSG00000277013 NA -0.1141
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 25.7933
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 34.1622
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.7636

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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