SHOGoiN Cell Transcriptome: GSM1269204

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269204


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T209Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 90.9014
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 90.8674
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 73.8140
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 57.7052
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 52.1484
6 ENSG00000226608 FTLP3 ferritin light chain pseudogene 3 40.8986
7 ENSG00000115414 FN1 fibronectin 1 37.1033
8 ENSG00000087086 FTL ferritin light chain 36.0906
9 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 35.9715
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 33.8270

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277125 NA -0.1010
57170 ENSG00000277124 NA -0.1010
57166 ENSG00000277120 MIR6089 microRNA 6089 -0.1010
57165 ENSG00000277119 NA -0.1010
57164 ENSG00000277118 NA -0.1010
57163 ENSG00000277117 ICOS ligand -0.1010
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 33.8270
9 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 35.9715
8 ENSG00000087086 FTL ferritin light chain 36.0906
7 ENSG00000115414 FN1 fibronectin 1 37.1033

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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