SHOGoiN Cell Transcriptome: GSM1269205

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269205


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T210Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 167.6447
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 85.2416
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 77.5385
4 ENSG00000155657 TTN titin 40.5640
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 31.7717
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.8397
7 ENSG00000143632 ACTA1 actin, alpha 1, skeletal muscle 30.1870
8 ENSG00000075624 ACTB actin, beta 29.3062
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.3900
10 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 27.7569

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0712
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0712
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0712
60672 ENSG00000283118 NA -0.0712
60671 ENSG00000283110 NA -0.0712
60670 ENSG00000283108 NA -0.0712
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0712
60668 ENSG00000283098 NA -0.0712
60667 ENSG00000283097 NA -0.0712
60666 ENSG00000283096 NA -0.0712

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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