SHOGoiN Cell Transcriptome: GSM1269206

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269206


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T211Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 117.7790
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 87.5766
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 79.9660
4 ENSG00000167552 TUBA1A tubulin alpha 1a 53.3508
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 50.5487
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 35.7528
7 ENSG00000155657 TTN titin 34.3680
8 ENSG00000075624 ACTB actin beta 32.3509
9 ENSG00000176887 SOX11 SRY-box 11 30.3883
10 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 29.5487

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277089 NA -0.0976
57170 ENSG00000277087 NA -0.0976
57169 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0976
57168 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0976
57166 ENSG00000277081 NA -0.0976
57165 ENSG00000277077 NA -0.0976
57164 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0976
57162 ENSG00000277073 MIR6131 microRNA 6131 -0.0976
10 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 29.5487
9 ENSG00000176887 SOX11 SRY-box 11 30.3883

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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