SHOGoiN Cell Transcriptome: GSM1269208

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269208


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T213Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 146.8313
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 115.7677
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 83.1729
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 69.2012
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 61.2218
6 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 45.0486
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 42.4523
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 42.1494
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 36.9909
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 24.1319

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277103 NA -0.0241
57168 ENSG00000277099 NA -0.0241
57166 ENSG00000277096 NA -0.0241
57165 ENSG00000277095 NA -0.0241
57163 ENSG00000277089 NA -0.0241
57162 ENSG00000277087 NA -0.0241
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 24.1319
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 36.9909
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 42.1494
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 42.4523

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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