SHOGoiN Cell Transcriptome: GSM1269209

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269209


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T214Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 117.8675
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.2843
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 55.5089
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 52.6961
5 ENSG00000075624 ACTB actin beta 47.6474
6 ENSG00000137801 THBS1 thrombospondin 1 47.6041
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 45.6712
8 ENSG00000167552 TUBA1A tubulin alpha 1a 43.2045
9 ENSG00000153904 DDAH1 dimethylarginine dimethylaminohydrolase 1 36.3816
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.0787

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277120 MIR6089 microRNA 6089 -0.1132
57168 ENSG00000277119 NA -0.1132
57167 ENSG00000277118 NA -0.1132
57166 ENSG00000277117 ICOS ligand -0.1132
57163 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1132
57162 ENSG00000277109 NA -0.1132
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.0787
9 ENSG00000153904 DDAH1 dimethylarginine dimethylaminohydrolase 1 36.3816
8 ENSG00000167552 TUBA1A tubulin alpha 1a 43.2045
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 45.6712

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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