SHOGoiN Cell Transcriptome: GSM1269213

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269213


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T218Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 94.6845
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 82.6419
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 78.0864
4 ENSG00000115414 FN1 fibronectin 1 75.1205
5 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 59.9744
6 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 56.2171
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 45.2618
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 41.0779
9 ENSG00000146674 IGFBP3 insulin like growth factor binding protein 3 35.6346
10 ENSG00000105974 CAV1 caveolin 1 35.0497

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277099 NA -0.0939
57168 ENSG00000277096 NA -0.0939
57167 ENSG00000277095 NA -0.0939
57165 ENSG00000277089 NA -0.0939
57164 ENSG00000277087 NA -0.0939
57163 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0939
57162 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0939
10 ENSG00000105974 CAV1 caveolin 1 35.0497
9 ENSG00000146674 IGFBP3 insulin like growth factor binding protein 3 35.6346
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 41.0779

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...