SHOGoiN Cell Transcriptome: GSM1269214

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269214


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T219Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 141.1659
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 133.3731
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 55.1966
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 52.0828
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH dehydrogenase 4 43.2390
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 40.9502
7 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 37.9314
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 35.1974
9 ENSG00000100234 TIMP3 TIMP metallopeptidase inhibitor 3 32.8955
10 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 30.1648

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0534
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0534
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0534
60672 ENSG00000283118 NA -0.0534
60671 ENSG00000283110 NA -0.0534
60670 ENSG00000283108 NA -0.0534
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0534
60668 ENSG00000283098 NA -0.0534
60667 ENSG00000283097 NA -0.0534
60666 ENSG00000283096 NA -0.0534

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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