SHOGoiN Cell Transcriptome: GSM1269218

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269218


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T221Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 91.0207
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 82.0619
3 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 71.7028
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 68.8415
5 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 64.0836
6 ENSG00000137801 THBS1 thrombospondin 1 47.9192
7 ENSG00000075624 ACTB actin beta 44.4294
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 41.4192
9 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 38.6020
10 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 37.4663

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277089 NA -0.1000
57169 ENSG00000277087 NA -0.1000
57168 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1000
57167 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1000
57165 ENSG00000277081 NA -0.1000
57164 ENSG00000277077 NA -0.1000
57163 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1000
10 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 37.4663
9 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 38.6020
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 41.4192

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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