SHOGoiN Cell Transcriptome: GSM1269220

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269220


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T222Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 77.0441
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 76.9588
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.0013
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 69.0296
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 67.3457
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 66.3652
7 ENSG00000091986 CCDC80 coiled-coil domain containing 80 43.4515
8 ENSG00000167601 AXL AXL receptor tyrosine kinase 39.5224
9 ENSG00000184009 ACTG1 actin gamma 1 29.2414
10 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 27.9767

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1095
57170 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1095
57168 ENSG00000277081 NA -0.1095
57167 ENSG00000277077 NA -0.1095
57166 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1095
57164 ENSG00000277073 MIR6131 microRNA 6131 -0.1095
57163 ENSG00000277066 NA -0.1095
10 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 27.9767
9 ENSG00000184009 ACTG1 actin gamma 1 29.2414
8 ENSG00000167601 AXL AXL receptor tyrosine kinase 39.5224

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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