SHOGoiN Cell Transcriptome: GSM1269222

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269222


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T224Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 115.1179
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 101.8827
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 72.9363
4 ENSG00000155657 TTN titin 60.2290
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 44.9730
6 ENSG00000137801 THBS1 thrombospondin 1 33.5765
7 ENSG00000124491 F13A1 coagulation factor XIII A chain 28.0785
8 ENSG00000075624 ACTB actin beta 26.9437
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 25.9849
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 25.1414

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277081 NA -0.0971
57169 ENSG00000277077 NA -0.0971
57168 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0971
57166 ENSG00000277073 MIR6131 microRNA 6131 -0.0971
57165 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.0971
57164 ENSG00000277066 NA -0.0971
57162 ENSG00000277063 MIR8084 microRNA 8084 -0.0971
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 25.1414
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 25.9849
8 ENSG00000075624 ACTB actin beta 26.9437

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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