SHOGoiN Cell Transcriptome: GSM1269223

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269223


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T225Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 147.8381
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 86.2810
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 73.9194
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 72.4928
5 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 62.0354
6 ENSG00000280800 NA 40.4224
7 ENSG00000280614 NA 40.2632
8 ENSG00000281181 NA 39.8530
9 ENSG00000167552 TUBA1A tubulin, alpha 1a 38.7448
10 ENSG00000126947 ARMCX1 armadillo repeat containing, X-linked 1 36.6692

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0299
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0299
60673 ENSG00000283118 NA -0.0299
60672 ENSG00000283110 NA -0.0299
60671 ENSG00000283108 NA -0.0299
60670 ENSG00000283103 NA -0.0299
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0299
60668 ENSG00000283098 NA -0.0299
60667 ENSG00000283097 NA -0.0299
60666 ENSG00000283096 NA -0.0299

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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