SHOGoiN Cell Transcriptome: GSM1269223

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269223


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T225Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 147.8381
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 86.2810
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 73.9194
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 72.4928
5 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 62.0354
6 ENSG00000280800 NA 40.4224
7 ENSG00000280614 NA 40.2632
8 ENSG00000281181 NA 39.8530
9 ENSG00000167552 TUBA1A tubulin alpha 1a 38.7448
10 ENSG00000126947 ARMCX1 armadillo repeat containing X-linked 1 36.6692

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277304 NA -0.0299
57169 ENSG00000277301 NA -0.0299
57168 ENSG00000277299 NA -0.0299
57167 ENSG00000277297 ATP5F1AP10 ATP synthase F1 subunit alpha pseudogene 10 -0.0299
57165 ENSG00000277295 RN7SL489P RNA, 7SL, cytoplasmic 489, pseudogene -0.0299
57163 ENSG00000277290 NA -0.0299
57162 ENSG00000277289 NA -0.0299
10 ENSG00000126947 ARMCX1 armadillo repeat containing X-linked 1 36.6692
9 ENSG00000167552 TUBA1A tubulin alpha 1a 38.7448
8 ENSG00000281181 NA 39.8530

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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