SHOGoiN Cell Transcriptome: GSM1269224

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269224


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T226Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 115.5824
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 89.5280
3 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 54.9578
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 43.4257
5 ENSG00000137801 THBS1 thrombospondin 1 41.6445
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 38.7258
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.0009
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 34.5524
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 33.2588
10 ENSG00000075624 ACTB actin beta 33.1807

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277144 NA -0.1088
57169 ENSG00000277143 NA -0.1088
57168 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.1088
57167 ENSG00000277141 NA -0.1088
57166 ENSG00000277138 MIR6509 microRNA 6509 -0.1088
57164 ENSG00000277136 NA -0.1088
57163 ENSG00000277135 NA -0.1088
57162 ENSG00000277133 NA -0.1088
10 ENSG00000075624 ACTB actin beta 33.1807
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 33.2588

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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