SHOGoiN Cell Transcriptome: GSM1269225

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269225


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T227Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 103.1037
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 85.1330
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 66.4421
4 ENSG00000167601 AXL AXL receptor tyrosine kinase 54.3750
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 53.2888
6 ENSG00000091986 CCDC80 coiled-coil domain containing 80 45.1890
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.6159
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 38.2581
9 ENSG00000075624 ACTB actin beta 32.1183
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.4889

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277096 NA -0.1156
57169 ENSG00000277095 NA -0.1156
57167 ENSG00000277089 NA -0.1156
57166 ENSG00000277087 NA -0.1156
57165 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.1156
57164 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.1156
57162 ENSG00000277081 NA -0.1156
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.4889
9 ENSG00000075624 ACTB actin beta 32.1183
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 38.2581

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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