SHOGoiN Cell Transcriptome: GSM1269230

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269230


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T229Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 90.9262
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 79.4352
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 72.9599
4 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 60.4366
5 ENSG00000131711 MAP1B microtubule associated protein 1B 32.4872
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 30.1406
7 ENSG00000184009 ACTG1 actin gamma 1 30.0116
8 ENSG00000115414 FN1 fibronectin 1 29.8665
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.9310
10 ENSG00000162695 SLC30A7 solute carrier family 30 member 7 28.5843

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277127 NA -0.1151
57170 ENSG00000277125 NA -0.1151
57169 ENSG00000277124 NA -0.1151
57165 ENSG00000277120 MIR6089 microRNA 6089 -0.1151
57164 ENSG00000277119 NA -0.1151
57163 ENSG00000277118 NA -0.1151
57162 ENSG00000277117 ICOS ligand -0.1151
10 ENSG00000162695 SLC30A7 solute carrier family 30 member 7 28.5843
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.9310
8 ENSG00000115414 FN1 fibronectin 1 29.8665

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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