SHOGoiN Cell Transcriptome: GSM1269233

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269233


Profile download
8000301-738Sequence Read ArchiveSRP033135SRP033135_T232Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 164.3096
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 51.7324
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 51.5531
4 ENSG00000075624 ACTB actin, beta 35.1262
5 ENSG00000167552 TUBA1A tubulin, alpha 1a 33.4626
6 ENSG00000155657 TTN titin 32.9844
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 28.6611
8 ENSG00000153904 DDAH1 dimethylarginine dimethylaminohydrolase 1 27.5952
9 ENSG00000258017 NA 27.1070
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 26.1706

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0984
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0984
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0984
60672 ENSG00000283118 NA -0.0984
60671 ENSG00000283110 NA -0.0984
60670 ENSG00000283108 NA -0.0984
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0984
60668 ENSG00000283098 NA -0.0984
60667 ENSG00000283097 NA -0.0984
60666 ENSG00000283096 NA -0.0984

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...