SHOGoiN Cell Transcriptome: GSM1269235

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269235


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T234Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 91.8426
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 87.6477
3 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 55.7097
4 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 53.6179
5 ENSG00000115414 FN1 fibronectin 1 49.5137
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 49.4173
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 43.6238
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 36.5888
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.8541
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 34.5254

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1110
57168 ENSG00000277103 NA -0.1110
57165 ENSG00000277099 NA -0.1110
57163 ENSG00000277096 NA -0.1110
57162 ENSG00000277095 NA -0.1110
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 34.5254
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.8541
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 36.5888
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 43.6238
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 49.4173

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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