SHOGoiN Cell Transcriptome: GSM1269239

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269239


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T237Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 178.6363
2 ENSG00000167552 TUBA1A tubulin, alpha 1a 82.9433
3 ENSG00000159173 TNNI1 troponin I type 1 (skeletal, slow) 37.1825
4 ENSG00000124491 F13A1 coagulation factor XIII, A1 polypeptide 30.5784
5 ENSG00000155657 TTN titin 28.7605
6 ENSG00000091527 CDV3 CDV3 homolog (mouse) 27.5208
7 ENSG00000103994 ZNF106 zinc finger protein 106 22.2263
8 ENSG00000165410 CFL2 cofilin 2 (muscle) 21.3339
9 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 20.6238
10 ENSG00000133055 MYBPH myosin binding protein H 20.0767

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0750
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0750
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0750
60672 ENSG00000283118 NA -0.0750
60671 ENSG00000283110 NA -0.0750
60670 ENSG00000283108 NA -0.0750
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0750
60668 ENSG00000283098 NA -0.0750
60667 ENSG00000283097 NA -0.0750
60666 ENSG00000283096 NA -0.0750

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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