SHOGoiN Cell Transcriptome: GSM1269239

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269239


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T237Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 178.6363
2 ENSG00000167552 TUBA1A tubulin alpha 1a 82.9433
3 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 37.1825
4 ENSG00000124491 F13A1 coagulation factor XIII A chain 30.5784
5 ENSG00000155657 TTN titin 28.7605
6 ENSG00000091527 CDV3 CDV3 homolog 27.5208
7 ENSG00000103994 ZNF106 zinc finger protein 106 22.2263
8 ENSG00000165410 CFL2 cofilin 2 21.3339
9 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 20.6238
10 ENSG00000133055 MYBPH myosin binding protein H 20.0767

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277200 NA -0.0750
57169 ENSG00000277199 LINC01632 long intergenic non-protein coding RNA 1632 -0.0750
57168 ENSG00000277198 RN7SL270P RNA, 7SL, cytoplasmic 270, pseudogene -0.0750
57166 ENSG00000277196 proline dehydrogenase 1, mitochondrial -0.0750
57165 ENSG00000277194 SNORD22 small nucleolar RNA, C/D box 22 -0.0750
57163 ENSG00000277191 NA -0.0750
10 ENSG00000133055 MYBPH myosin binding protein H 20.0767
9 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 20.6238
8 ENSG00000165410 CFL2 cofilin 2 21.3339
7 ENSG00000103994 ZNF106 zinc finger protein 106 22.2263

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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