SHOGoiN Cell Transcriptome: GSM1269243

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269243


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T241Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 102.2305
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 86.1293
3 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 81.9117
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 73.1690
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 72.9828
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 52.9878
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 40.0842
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.5147
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.4300
10 ENSG00000184009 ACTG1 actin gamma 1 31.4548

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277039 NA -0.1000
57170 ENSG00000277035 NA -0.1000
57169 ENSG00000277034 NA -0.1000
57168 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.1000
57167 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.1000
57166 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.1000
57165 ENSG00000277027 RMRP RNA component of mitochondrial RNA processing endoribonuclease -0.1000
57163 ENSG00000277024 NA -0.1000
10 ENSG00000184009 ACTG1 actin gamma 1 31.4548
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 33.4300

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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