SHOGoiN Cell Transcriptome: GSM1269244

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269244


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T242Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000148516 ZEB1 zinc finger E-box binding homeobox 1 165.4536
2 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase 6 99.3676
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 81.3699
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 61.0259
5 ENSG00000135720 DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 51.6402
6 ENSG00000168556 ING2 inhibitor of growth family, member 2 40.3466
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.2468
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 27.3511
9 ENSG00000157399 ARSE arylsulfatase E (chondrodysplasia punctata 1) 26.0619
10 ENSG00000215114 UBXN2B UBX domain protein 2B 25.4173

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0321
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0321
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0321
60672 ENSG00000283118 NA -0.0321
60671 ENSG00000283110 NA -0.0321
60670 ENSG00000283108 NA -0.0321
60669 ENSG00000283103 NA -0.0321
60668 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0321
60667 ENSG00000283098 NA -0.0321
60666 ENSG00000283097 NA -0.0321

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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