SHOGoiN Cell Transcriptome: GSM1269246

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269246


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T243Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 104.1550
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 82.7087
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 65.0894
4 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 63.7208
5 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 58.3941
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 52.0348
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 50.3958
8 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 37.7919
9 ENSG00000079332 SAR1A secretion associated Ras related GTPase 1A 31.5227
10 ENSG00000137801 THBS1 thrombospondin 1 27.7940

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277081 NA -0.1018
57169 ENSG00000277077 NA -0.1018
57168 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1018
57166 ENSG00000277073 MIR6131 microRNA 6131 -0.1018
57165 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.1018
57164 ENSG00000277066 NA -0.1018
57162 ENSG00000277063 MIR8084 microRNA 8084 -0.1018
10 ENSG00000137801 THBS1 thrombospondin 1 27.7940
9 ENSG00000079332 SAR1A secretion associated Ras related GTPase 1A 31.5227
8 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 37.7919

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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