SHOGoiN Cell Transcriptome: GSM1269248

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269248


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T245Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 120.7204
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.8745
3 ENSG00000115414 FN1 fibronectin 1 64.1644
4 ENSG00000075624 ACTB actin beta 53.3704
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 52.7200
6 ENSG00000184009 ACTG1 actin gamma 1 39.7115
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 37.1562
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 33.8577
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 31.5115
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 31.1630

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277073 MIR6131 microRNA 6131 -0.1116
57169 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.1116
57168 ENSG00000277067 uncharacterized LOC102724843 -0.1116
57167 ENSG00000277066 NA -0.1116
57165 ENSG00000277063 MIR8084 microRNA 8084 -0.1116
57164 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1116
57162 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1116
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 31.1630
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 31.5115
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 33.8577

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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