SHOGoiN Cell Transcriptome: GSM1269249

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269249


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T246Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 190.3348
2 ENSG00000105640 RPL18A ribosomal protein L18a 57.9006
3 ENSG00000065882 TBC1D1 TBC1 domain family member 1 24.7920
4 ENSG00000103994 ZNF106 zinc finger protein 106 24.7920
5 ENSG00000115414 FN1 fibronectin 1 24.7920
6 ENSG00000126432 PRDX5 peroxiredoxin 5 24.7920
7 ENSG00000009307 CSDE1 cold shock domain containing E1 16.5149
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 16.5149
9 ENSG00000124783 SSR1 signal sequence receptor subunit 1 16.5149
10 ENSG00000148677 ANKRD1 ankyrin repeat domain 1 16.5149

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277363 SRCIN1 SRC kinase signaling inhibitor 1 -0.0394
57169 ENSG00000277358 NA -0.0394
57168 ENSG00000277357 NPAP1P7 nuclear pore associated protein 1 pseudogene 7 -0.0394
57166 ENSG00000277352 NA -0.0394
57165 ENSG00000277351 NA -0.0394
57164 ENSG00000277350 NA -0.0394
57163 ENSG00000277349 NA -0.0394
10 ENSG00000148677 ANKRD1 ankyrin repeat domain 1 16.5149
9 ENSG00000124783 SSR1 signal sequence receptor subunit 1 16.5149
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 16.5149

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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