SHOGoiN Cell Transcriptome: GSM1269249

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269249


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T246Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 190.3348
2 ENSG00000105640 RPL18A ribosomal protein L18a 57.9006
3 ENSG00000065882 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 24.7920
4 ENSG00000103994 ZNF106 zinc finger protein 106 24.7920
5 ENSG00000115414 FN1 fibronectin 1 24.7920
6 ENSG00000126432 PRDX5 peroxiredoxin 5 24.7920
7 ENSG00000009307 CSDE1 cold shock domain containing E1, RNA-binding 16.5149
8 ENSG00000108821 COL1A1 collagen, type I, alpha 1 16.5149
9 ENSG00000124783 SSR1 signal sequence receptor, alpha 16.5149
10 ENSG00000148677 ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 16.5149

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0394
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0394
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0394
60672 ENSG00000283118 NA -0.0394
60671 ENSG00000283117 NA -0.0394
60670 ENSG00000283110 NA -0.0394
60669 ENSG00000283108 NA -0.0394
60668 ENSG00000283103 NA -0.0394
60667 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0394
60666 ENSG00000283098 NA -0.0394

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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