SHOGoiN Cell Transcriptome: GSM1269249

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269249


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T246Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 56.4437
2 ENSG00000149273 RPS3 ribosomal protein S3 56.4437
3 ENSG00000096384 HSP90AB1 heat shock protein 90 alpha family class B member 1 37.6139
4 ENSG00000103994 ZNF106 zinc finger protein 106 37.6139
5 ENSG00000124783 SSR1 signal sequence receptor subunit 1 37.6139
6 ENSG00000137154 RPS6 ribosomal protein S6 37.6139
7 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 37.6139
8 ENSG00000164096 C4orf3 chromosome 4 open reading frame 3 37.6139
9 ENSG00000000971 CFH complement factor H 18.7842
10 ENSG00000004897 CDC27 cell division cycle 27 18.7842

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0455
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0455
58733 ENSG00000285992 novel transcript -0.0455
58732 ENSG00000285991 novel transcript -0.0455
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0455
58730 ENSG00000285989 TEC -0.0455
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0455
58728 ENSG00000285987 NA -0.0455
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0455
58726 ENSG00000285985 NA -0.0455

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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