SHOGoiN Cell Transcriptome: GSM1269250

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269250


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T247Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 133.7031
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 97.3338
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 75.8501
4 ENSG00000075624 ACTB actin beta 45.8743
5 ENSG00000184009 ACTG1 actin gamma 1 44.2684
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 39.7080
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.3368
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 33.1856
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 30.2464
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.2237

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277052 MIR6763 microRNA 6763 -0.0930
57170 ENSG00000277051 NA -0.0930
57169 ENSG00000277050 NA -0.0930
57168 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0930
57166 ENSG00000277047 NA -0.0930
57164 ENSG00000277043 EEF1A1P42 eukaryotic translation elongation factor 1 alpha 1 pseudogene 42 -0.0930
57163 ENSG00000277041 NA -0.0930
57162 ENSG00000277040 NA -0.0930
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.2237
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 30.2464

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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