SHOGoiN Cell Transcriptome: GSM1269251

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269251


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T248Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 135.2747
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 76.0149
3 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 73.2177
4 ENSG00000075624 ACTB actin beta 61.9713
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 54.5314
6 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 49.4273
7 ENSG00000167552 TUBA1A tubulin alpha 1a 46.8031
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.4116
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 32.1251
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 31.9233

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277211 NA -0.0857
57169 ENSG00000277210 NA -0.0857
57168 ENSG00000277209 RPPH1 ribonuclease P RNA component H1 -0.0857
57167 ENSG00000277208 NA -0.0857
57165 ENSG00000277206 NA -0.0857
57163 ENSG00000277202 MIR8063 microRNA 8063 -0.0857
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 31.9233
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 32.1251
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.4116
7 ENSG00000167552 TUBA1A tubulin alpha 1a 46.8031

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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