SHOGoiN Cell Transcriptome: GSM1269252

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269252


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T249Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 196.2967
2 ENSG00000167552 TUBA1A tubulin alpha 1a 48.0528
3 ENSG00000075624 ACTB actin beta 40.0417
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 35.6432
5 ENSG00000155657 TTN titin 35.5725
6 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 28.7892
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 26.4486
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 25.0089
9 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 24.8764
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 20.7958

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277127 NA -0.0753
57170 ENSG00000277125 NA -0.0753
57169 ENSG00000277124 NA -0.0753
57165 ENSG00000277120 MIR6089 microRNA 6089 -0.0753
57164 ENSG00000277119 NA -0.0753
57163 ENSG00000277118 NA -0.0753
57162 ENSG00000277117 ICOS ligand -0.0753
10 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 20.7958
9 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 24.8764
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 25.0089

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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