SHOGoiN Cell Transcriptome: GSM1269253

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269253


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T250Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 116.3792
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 99.5862
3 ENSG00000075624 ACTB actin beta 66.8660
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 64.3993
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 63.5679
6 ENSG00000107796 ACTA2 actin, alpha 2, smooth muscle, aorta 59.3146
7 ENSG00000137801 THBS1 thrombospondin 1 41.5047
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.4037
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 32.6960
10 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 28.8688

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277120 MIR6089 microRNA 6089 -0.0861
57168 ENSG00000277119 NA -0.0861
57167 ENSG00000277118 NA -0.0861
57166 ENSG00000277117 ICOS ligand -0.0861
57163 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0861
57162 ENSG00000277109 NA -0.0861
10 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 28.8688
9 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 32.6960
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.4037
7 ENSG00000137801 THBS1 thrombospondin 1 41.5047

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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