SHOGoiN Cell Transcriptome: GSM1269254

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269254


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T251Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 129.4364
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 103.9455
3 ENSG00000115414 FN1 fibronectin 1 79.6017
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 67.0993
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.2363
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 33.2670
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 32.4601
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 28.0074
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 27.0061
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 24.2353

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.0987
57170 ENSG00000277013 NA -0.0987
57169 ENSG00000277011 NA -0.0987
57168 ENSG00000277010 NA -0.0987
57167 ENSG00000277009 NA -0.0987
57166 ENSG00000277008 TEX28P2 testis expressed 28 pseudogene 2 -0.0987
57165 ENSG00000277007 NA -0.0987
57164 ENSG00000277004 RNA5SP412 RNA, 5S ribosomal pseudogene 412 -0.0987
57163 ENSG00000277003 NA -0.0987
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 24.2353

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...