SHOGoiN Cell Transcriptome: GSM1269255

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269255


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T252Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 121.1191
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 87.4178
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 84.7846
4 ENSG00000155657 TTN titin 78.2489
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 56.1413
6 ENSG00000167552 TUBA1A tubulin alpha 1a 51.2917
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 45.4569
8 ENSG00000143632 ACTA1 actin, alpha 1, skeletal muscle 37.1595
9 ENSG00000075624 ACTB actin beta 33.3707
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.5061

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277051 NA -0.0843
57170 ENSG00000277050 NA -0.0843
57169 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0843
57167 ENSG00000277047 NA -0.0843
57165 ENSG00000277043 EEF1A1P42 eukaryotic translation elongation factor 1 alpha 1 pseudogene 42 -0.0843
57164 ENSG00000277041 NA -0.0843
57163 ENSG00000277040 NA -0.0843
57162 ENSG00000277039 NA -0.0843
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.5061
9 ENSG00000075624 ACTB actin beta 33.3707

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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