SHOGoiN Cell Transcriptome: GSM1269256

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269256


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T253Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 151.0352
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 100.2024
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 68.3390
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 55.6857
5 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 41.1914
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.1328
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.0582
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 24.0134
9 ENSG00000075624 ACTB actin beta 21.8184
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 20.1898

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277103 NA -0.0895
57166 ENSG00000277099 NA -0.0895
57164 ENSG00000277096 NA -0.0895
57163 ENSG00000277095 NA -0.0895
10 ENSG00000167601 AXL AXL receptor tyrosine kinase 20.1898
9 ENSG00000075624 ACTB actin beta 21.8184
8 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 24.0134
7 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.0582
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.1328
5 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 41.1914

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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