SHOGoiN Cell Transcriptome: GSM1269257

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269257


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T254Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 121.3395
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 103.4795
3 ENSG00000115414 FN1 fibronectin 1 84.4564
4 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 49.7747
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 45.9469
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 36.6560
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 33.9378
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 33.0777
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.0109
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.0022

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277052 MIR6763 microRNA 6763 -0.0889
57170 ENSG00000277051 NA -0.0889
57169 ENSG00000277050 NA -0.0889
57168 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0889
57167 ENSG00000277047 NA -0.0889
57165 ENSG00000277041 NA -0.0889
57164 ENSG00000277040 NA -0.0889
57163 ENSG00000277039 NA -0.0889
57162 ENSG00000277035 NA -0.0889
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 28.0022

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...