SHOGoiN Cell Transcriptome: GSM1269259

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269259


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T256Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 114.6211
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 87.6121
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 77.6268
4 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 57.9279
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 56.7104
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.7905
7 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 40.5907
8 ENSG00000137801 THBS1 thrombospondin 1 40.4653
9 ENSG00000075624 ACTB actin beta 34.5922
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.5367

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000276993 NA -0.0978
57169 ENSG00000276992 NA -0.0978
57168 ENSG00000276991 NA -0.0978
57165 ENSG00000276988 NA -0.0978
57163 ENSG00000276984 NA -0.0978
57162 ENSG00000276980 NA -0.0978
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.5367
9 ENSG00000075624 ACTB actin beta 34.5922
8 ENSG00000137801 THBS1 thrombospondin 1 40.4653
7 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 40.5907

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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