SHOGoiN Cell Transcriptome: GSM1269259

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269259


Profile download
8000301-738Sequence Read ArchiveSRP033135SRP033135_T256Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 114.6211
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 87.6121
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 77.6268
4 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 57.9279
5 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 56.7104
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.7905
7 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 40.5907
8 ENSG00000137801 THBS1 thrombospondin 1 40.4653
9 ENSG00000075624 ACTB actin, beta 34.5922
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.5367

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0978
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0978
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0978
60672 ENSG00000283118 NA -0.0978
60671 ENSG00000283110 NA -0.0978
60670 ENSG00000283108 NA -0.0978
60669 ENSG00000283103 NA -0.0978
60668 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0978
60667 ENSG00000283098 NA -0.0978
60666 ENSG00000283097 NA -0.0978

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...