SHOGoiN Cell Transcriptome: GSM1269260

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269260


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T257Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 124.1309
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 120.2346
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 91.0129
4 ENSG00000167552 TUBA1A tubulin alpha 1a 47.8472
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 44.3726
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.9382
7 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 27.7380
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S RNA 27.1879
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 25.5790
10 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 22.3520

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277020 NA -0.0857
57170 ENSG00000277017 NA -0.0857
57169 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.0857
57168 ENSG00000277013 NA -0.0857
57167 ENSG00000277011 NA -0.0857
57166 ENSG00000277010 NA -0.0857
57165 ENSG00000277009 NA -0.0857
57164 ENSG00000277008 TEX28P2 testis expressed 28 pseudogene 2 -0.0857
57163 ENSG00000277007 NA -0.0857
57162 ENSG00000277004 RNA5SP412 RNA, 5S ribosomal pseudogene 412 -0.0857

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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