SHOGoiN Cell Transcriptome: GSM1269261

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269261


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T258Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 129.1678
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 117.0289
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 79.7816
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 48.9870
5 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 45.5211
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 33.0148
7 ENSG00000115414 FN1 fibronectin 1 32.0724
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.3634
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.2134
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.7280

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277000 DUSP12P1 dual specificity phosphatase 12 pseudogene 1 -0.0957
57170 ENSG00000276998 REXO1L2P REXO1 like 2, pseudogene -0.0957
57169 ENSG00000276997 NA -0.0957
57167 ENSG00000276993 NA -0.0957
57166 ENSG00000276992 NA -0.0957
57165 ENSG00000276991 NA -0.0957
57162 ENSG00000276988 NA -0.0957
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.7280
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 29.2134
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.3634

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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