SHOGoiN Cell Transcriptome: GSM1269262

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269262


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T259Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 134.3091
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 86.4626
3 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 73.3032
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 53.6272
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 34.4948
6 ENSG00000176887 SOX11 SRY (sex determining region Y)-box 11 32.5800
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 31.0198
8 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 30.9253
9 ENSG00000124491 F13A1 coagulation factor XIII, A1 polypeptide 27.7891
10 ENSG00000159173 TNNI1 troponin I type 1 (skeletal, slow) 26.9065

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1057
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.1057
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1057
60672 ENSG00000283118 NA -0.1057
60671 ENSG00000283110 NA -0.1057
60670 ENSG00000283108 NA -0.1057
60669 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1057
60668 ENSG00000283098 NA -0.1057
60667 ENSG00000283097 NA -0.1057
60666 ENSG00000283096 NA -0.1057

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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