SHOGoiN Cell Transcriptome: GSM1269262

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269262


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T259Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 130.3835
2 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 82.4717
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 80.1626
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 45.0855
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 32.9362
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 29.5419
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.9136
8 ENSG00000176887 SOX11 SRY-box 11 27.8447
9 ENSG00000124491 F13A1 coagulation factor XIII A chain 26.7514
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 26.7187

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1011
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1011
58733 ENSG00000285992 novel transcript -0.1011
58732 ENSG00000285991 novel transcript -0.1011
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1011
58730 ENSG00000285989 TEC -0.1011
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1011
58728 ENSG00000285987 NA -0.1011
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1011
58726 ENSG00000285985 NA -0.1011

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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