SHOGoiN Cell Transcriptome: GSM1269262

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269262


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T259Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 134.3091
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 86.4626
3 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 73.3032
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 53.6272
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 34.4948
6 ENSG00000176887 SOX11 SRY-box 11 32.5800
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 31.0198
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 30.9253
9 ENSG00000124491 F13A1 coagulation factor XIII A chain 27.7891
10 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 26.9065

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1057
57169 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1057
57168 ENSG00000277057 MIR6779 microRNA 6779 -0.1057
57167 ENSG00000277056 NA -0.1057
57165 ENSG00000277052 MIR6763 microRNA 6763 -0.1057
57164 ENSG00000277051 NA -0.1057
57163 ENSG00000277050 NA -0.1057
57162 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1057
10 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 26.9065
9 ENSG00000124491 F13A1 coagulation factor XIII A chain 27.7891

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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