SHOGoiN Cell Transcriptome: GSM1269265

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269265


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T261Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 133.7252
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 120.8611
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 86.8650
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 63.9150
5 ENSG00000155657 TTN titin 49.4371
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.6323
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 32.3298
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 30.9954
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 30.3076
10 ENSG00000137801 THBS1 thrombospondin 1 29.2240

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277171 NA -0.0542
57170 ENSG00000277170 NA -0.0542
57168 ENSG00000277168 NA -0.0542
57167 ENSG00000277162 NA -0.0542
57166 ENSG00000277161 PIGW phosphatidylinositol glycan anchor biosynthesis class W -0.0542
57164 ENSG00000277159 NA -0.0542
57162 ENSG00000277157 HIST1H4D histone cluster 1 H4 family member d -0.0542
10 ENSG00000137801 THBS1 thrombospondin 1 29.2240
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 30.3076
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 30.9954

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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