SHOGoiN Cell Transcriptome: GSM1269265

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269265


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T261Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 133.7252
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 120.8611
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 86.8650
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 63.9150
5 ENSG00000155657 TTN titin 49.4371
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 39.6323
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 32.3298
8 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 30.9954
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase 6 30.3076
10 ENSG00000137801 THBS1 thrombospondin 1 29.2240

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0542
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0542
60673 ENSG00000283118 NA -0.0542
60672 ENSG00000283110 NA -0.0542
60671 ENSG00000283108 NA -0.0542
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0542
60669 ENSG00000283098 NA -0.0542
60668 ENSG00000283097 NA -0.0542
60667 ENSG00000283096 NA -0.0542
60666 ENSG00000283095 NA -0.0542

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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