SHOGoiN Cell Transcriptome: GSM1269266

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269266


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T262Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 120.1497
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 109.1039
3 ENSG00000115414 FN1 fibronectin 1 99.3403
4 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 57.6091
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 49.5553
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 29.0609
7 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 28.4985
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 27.6886
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 27.3062
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.1937

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277081 NA -0.0947
57170 ENSG00000277077 NA -0.0947
57169 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0947
57167 ENSG00000277073 MIR6131 microRNA 6131 -0.0947
57166 ENSG00000277066 NA -0.0947
57164 ENSG00000277063 MIR8084 microRNA 8084 -0.0947
57163 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.0947
10 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 27.1937
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 27.3062
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 27.6886

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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