SHOGoiN Cell Transcriptome: GSM1269267

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269267


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T263Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 120.8920
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 102.8704
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.7378
4 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 53.7937
5 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 44.4254
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 43.3884
7 ENSG00000075624 ACTB actin beta 38.7042
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.1541
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.8913
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 28.3347

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277050 NA -0.1012
57170 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1012
57169 ENSG00000277047 NA -0.1012
57167 ENSG00000277041 NA -0.1012
57166 ENSG00000277040 NA -0.1012
57165 ENSG00000277039 NA -0.1012
57164 ENSG00000277035 NA -0.1012
57163 ENSG00000277034 NA -0.1012
57162 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.1012
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 28.3347

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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