SHOGoiN Cell Transcriptome: GSM1269267

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269267


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T263Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 120.8920
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 102.8704
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.7378
4 ENSG00000108821 COL1A1 collagen, type I, alpha 1 53.7937
5 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 44.4254
6 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 43.3884
7 ENSG00000075624 ACTB actin, beta 38.7042
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.1541
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 30.8913
10 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 28.3347

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.1012
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.1012
60673 ENSG00000283118 NA -0.1012
60672 ENSG00000283110 NA -0.1012
60671 ENSG00000283108 NA -0.1012
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.1012
60669 ENSG00000283098 NA -0.1012
60668 ENSG00000283097 NA -0.1012
60667 ENSG00000283096 NA -0.1012
60666 ENSG00000283095 NA -0.1012

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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