SHOGoiN Cell Transcriptome: GSM1269269

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269269


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T265Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 149.6207
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.6367
3 ENSG00000115414 FN1 fibronectin 1 64.4777
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 53.8121
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 46.2970
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 33.4824
7 ENSG00000131711 MAP1B microtubule-associated protein 1B 31.2314
8 ENSG00000184009 ACTG1 actin gamma 1 31.1960
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH dehydrogenase 4 30.9921
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 30.7750

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0962
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0962
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0962
60672 ENSG00000283118 NA -0.0962
60671 ENSG00000283110 NA -0.0962
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0962
60669 ENSG00000283098 NA -0.0962
60668 ENSG00000283097 NA -0.0962
60667 ENSG00000283096 NA -0.0962
60666 ENSG00000283093 NA -0.0962

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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