SHOGoiN Cell Transcriptome: GSM1269269

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269269


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T265Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 149.6207
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.6367
3 ENSG00000115414 FN1 fibronectin 1 64.4777
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 53.8121
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 46.2970
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 33.4824
7 ENSG00000131711 MAP1B microtubule associated protein 1B 31.2314
8 ENSG00000184009 ACTG1 actin gamma 1 31.1960
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.9921
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 30.7750

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277022 NA -0.0962
57168 ENSG00000277020 NA -0.0962
57167 ENSG00000277017 NA -0.0962
57166 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.0962
57165 ENSG00000277013 NA -0.0962
57164 ENSG00000277011 NA -0.0962
57163 ENSG00000277010 NA -0.0962
57162 ENSG00000277009 NA -0.0962
10 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 30.7750
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.9921

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...