SHOGoiN Cell Transcriptome: GSM1269270

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269270


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T266Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 180.0559
2 ENSG00000105640 RPL18A ribosomal protein L18a 98.1957
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 59.9942
4 ENSG00000126432 PRDX5 peroxiredoxin 5 38.1648
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 27.2501
6 ENSG00000115414 FN1 fibronectin 1 21.7927
7 ENSG00000120708 TGFBI transforming growth factor beta induced 21.7927
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 21.7927
9 ENSG00000074590 NUAK1 NUAK family kinase 1 16.3354
10 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 16.3354

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277358 NA -0.0367
57169 ENSG00000277357 NPAP1P7 nuclear pore associated protein 1 pseudogene 7 -0.0367
57167 ENSG00000277352 NA -0.0367
57166 ENSG00000277351 NA -0.0367
57165 ENSG00000277350 NA -0.0367
57164 ENSG00000277349 NA -0.0367
10 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 16.3354
9 ENSG00000074590 NUAK1 NUAK family kinase 1 16.3354
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 21.7927
7 ENSG00000120708 TGFBI transforming growth factor beta induced 21.7927

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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