SHOGoiN Cell Transcriptome: GSM1269270

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269270


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8000301-738Sequence Read ArchiveSRP033135SRP033135_T266Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000213442 RPL18AP3 ribosomal protein L18a pseudogene 3 180.0559
2 ENSG00000105640 RPL18A ribosomal protein L18a 98.1957
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 59.9942
4 ENSG00000126432 PRDX5 peroxiredoxin 5 38.1648
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 27.2501
6 ENSG00000115414 FN1 fibronectin 1 21.7927
7 ENSG00000120708 TGFBI transforming growth factor, beta-induced, 68kDa 21.7927
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH dehydrogenase 4 21.7927
9 ENSG00000074590 NUAK1 NUAK family, SNF1-like kinase, 1 16.3354
10 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 16.3354

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0367
60674 ENSG00000283123 RARRES2P11 retinoic acid receptor responder (tazarotene induced) 2 pseudogene 11 -0.0367
60673 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0367
60672 ENSG00000283118 NA -0.0367
60671 ENSG00000283117 NA -0.0367
60670 ENSG00000283110 NA -0.0367
60669 ENSG00000283108 NA -0.0367
60668 ENSG00000283103 NA -0.0367
60667 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0367
60666 ENSG00000283098 NA -0.0367

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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