SHOGoiN Cell Transcriptome: GSM1269272

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269272


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T268Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 210.6153
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 43.2557
3 ENSG00000133110 POSTN periostin 39.4260
4 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 31.6292
5 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 30.2269
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 23.3806
7 ENSG00000075624 ACTB actin beta 20.7960
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 20.5211
9 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 19.8533
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 17.2884

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277124 NA -0.0729
57167 ENSG00000277120 MIR6089 microRNA 6089 -0.0729
57166 ENSG00000277119 NA -0.0729
57165 ENSG00000277118 NA -0.0729
57164 ENSG00000277117 ICOS ligand -0.0729
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 17.2884
9 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 19.8533
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 20.5211
7 ENSG00000075624 ACTB actin beta 20.7960
6 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 23.3806

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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