SHOGoiN Cell Transcriptome: GSM1269273

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269273


Profile download
8000301-738Sequence Read ArchiveSRP033135SRP033135_T269Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 136.0488
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 104.0131
3 ENSG00000115414 FN1 fibronectin 1 69.2937
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 67.8117
5 ENSG00000108821 COL1A1 collagen, type I, alpha 1 56.3160
6 ENSG00000113140 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 38.1552
7 ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 33.8293
8 ENSG00000075624 ACTB actin, beta 26.8437
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 23.1587
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 22.4938

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
60675 ENSG00000283125 NA -0.0890
60674 ENSG00000283122 HYMAI hydatidiform mole associated and imprinted (non-protein coding) -0.0890
60673 ENSG00000283118 NA -0.0890
60672 ENSG00000283110 NA -0.0890
60671 ENSG00000283108 NA -0.0890
60670 ENSG00000283101 BMS1P21 BMS1 ribosome biogenesis factor pseudogene 21 -0.0890
60669 ENSG00000283098 NA -0.0890
60668 ENSG00000283097 NA -0.0890
60667 ENSG00000283096 NA -0.0890
60666 ENSG00000283093 NA -0.0890

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...