SHOGoiN Cell Transcriptome: GSM1269274

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269274


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T270Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 150.5452
2 ENSG00000075624 ACTB actin beta 60.3109
3 ENSG00000133110 POSTN periostin 49.6165
4 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 46.9143
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 43.3046
6 ENSG00000184009 ACTG1 actin gamma 1 43.1971
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 40.2193
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 38.2767
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.6148
10 ENSG00000106366 SERPINE1 serpin family E member 1 30.6474

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277066 NA -0.1052
57169 ENSG00000277063 MIR8084 microRNA 8084 -0.1052
57168 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1052
57166 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1052
57165 ENSG00000277057 MIR6779 microRNA 6779 -0.1052
57164 ENSG00000277056 NA -0.1052
57162 ENSG00000277052 MIR6763 microRNA 6763 -0.1052
10 ENSG00000106366 SERPINE1 serpin family E member 1 30.6474
9 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 35.6148
8 ENSG00000231991 ANXA2P2 annexin A2 pseudogene 2 38.2767

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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