SHOGoiN Cell Transcriptome: GSM1269275

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269275


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T271Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 151.3118
2 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 93.9042
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 79.2635
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 69.6081
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 68.0157
6 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 66.7708
7 ENSG00000155657 TTN titin 45.1095
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 37.8980
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 37.4035
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 27.8683

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277150 F8A3 coagulation factor VIII associated 3 -0.0307
57170 ENSG00000277147 LINC00869 long intergenic non-protein coding RNA 869 -0.0307
57169 ENSG00000277146 NA -0.0307
57167 ENSG00000277144 NA -0.0307
57166 ENSG00000277143 NA -0.0307
57165 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.0307
57164 ENSG00000277141 NA -0.0307
57163 ENSG00000277138 MIR6509 microRNA 6509 -0.0307
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 27.8683
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 37.4035

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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