SHOGoiN Cell Transcriptome: GSM1269276

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269276


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T272Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 125.1978
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 85.0879
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 60.3742
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 55.0379
5 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 49.8242
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 44.2506
7 ENSG00000182718 ANXA2 annexin A2 33.3408
8 ENSG00000115414 FN1 fibronectin 1 32.7742
9 ENSG00000100234 TIMP3 TIMP metallopeptidase inhibitor 3 29.9185
10 ENSG00000128595 CALU calumenin 23.8013

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1008
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1008
58733 ENSG00000285992 novel transcript -0.1008
58732 ENSG00000285991 novel transcript -0.1008
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1008
58730 ENSG00000285989 TEC -0.1008
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1008
58728 ENSG00000285987 NA -0.1008
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1008
58726 ENSG00000285985 NA -0.1008

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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